The leading journal in its field, Bioinformatics publishes the highest quality scientific papers and review articles of interest to academic and industrial researchers. Its main focus is on new developments in genome bioinformatics and computational biology. Two distinct sections within the journal - Discovery Notes and Application Notes- focus on shorter papers; the former reporting biologically interesting discoveries using computational methods, the latter exploring the applications used for experiments.
生物信息学是该领域的领先期刊,发表学术和工业研究人员感兴趣的最高质量的科学论文和评论文章。其主要关注基因组生物信息学和计算生物学的新发展。期刊中有两个不同的部分--发现笔记和应用笔记--专注于较短的论文;前者报告了使用计算方法的生物学上有趣的发现,后者探索了用于实验的应用。
iTerm-PseKNC: a sequence-based tool for predicting bacterial transcriptional terminators
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty827
MinIONQC: fast and simple quality control for MinION sequencing data
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty654
NEMO: cancer subtyping by integration of partial multi-omic data
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz058
Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz447
FastSpar: rapid and scalable correlation estimation for compositional data
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty734
MAGpy: a reproducible pipeline for the downstream analysis of metagenome-assembled genomes (MAGs)
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty905
Colocalization analyses of genomic elements: approaches, recommendations and challenges
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty835
Heritability estimation and differential analysis of count data with generalized linear mixed models in genomic sequencing studies
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty644
CoMM: a collaborative mixed model to dissecting genetic contributions to complex traits by leveraging regulatory information
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty865
Robust prediction of clinical outcomes using cytometry data
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty768
WIlsON: Web-based Interactive Omics VisualizatioN
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty711
A natural upper bound to the accuracy of predicting protein stability changes upon mutations
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty880
Improving protein function prediction using protein sequence and GO-term similarities
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty751
Global importance of RNA secondary structures in protein-coding sequences
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty678
atSNP Search: a web resource for statistically evaluating influence of human genetic variation on transcription factor binding
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty1010
copMEM: finding maximal exact matches via sampling both genomes
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty670
NanoShaper–VMD interface: computing and visualizing surfaces, pockets and channels in molecular systems
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty761
PhenoPro: a novel toolkit for assisting in the diagnosis of Mendelian disease
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz100
SolidBin: improving metagenome binning with semi-supervised normalized cut
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz253
The Encyclopedia of Proteome Dynamics: the KinoViewer
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty823
Surrogate minimal depth as an importance measure for variables in random forests
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz149
sAOP: linking chemical stressors to adverse outcomes pathway networks
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz570
Distance measures for tumor evolutionary trees
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz869
CoCo: RNA-seq read assignment correction for nested genes and multimapped reads
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz433
Long-term context-dependent genetic adaptation of the viral genetic cloud
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty891
simuG: a general-purpose genome simulator
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz424
The nPYc-Toolbox, a Python module for the pre-processing, quality-control and analysis of metabolic profiling datasets
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz566
The epiGenomic Efficient Correlator (epiGeEC) tool allows fast comparison of user datasets with thousands of public epigenomic datasets
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty655
EROS-DOCK: protein-protein docking using exhaustive branch-and-bound rotational search
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz434
KEDDY: a knowledge‐based statistical gene set test method to detect differential functional protein‐protein interactions
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty686
ISDB: a database toolkit for storing and analyzing viral integration site data
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty712
Simultaneous clustering of multiview biomedical data using manifold optimization
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz217
NFPws: a web server for delineating broadly neutralizing antibody specificities from serum HIV-1 neutralization data
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz097
A framework and an algorithm to detect low‐abundance DNA by a handy sequencer and a palm‐sized computer
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty663
RMTL: an R library for multi-task learning
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty831
When a single lineage is not enough: Uncertainty-Aware Tracking for spatio-temporal live-cell image analysis
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty776
MetaQUBIC: a computational pipeline for gene-level functional profiling of metagenome and metatranscriptome
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz414
A new statistic for efficient detection of repetitive sequences
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz262
DECO: decompose heterogeneous population cohorts for patient stratification and discovery of sample biomarkers using omic data profiling
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz148
Accounting for ambiguity in ancestral sequence reconstruction
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz249
StructureProfiler: an all‐in‐one tool for 3D protein structure profiling
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty692
Compressed filesystem for managing large genome collections
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz192
GenomeWarp: an alignment-based variant coordinate transformation
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz218
A fully computational and reasonable representation for karyotypes
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz440
Kinpute: using identity by descent to improve genotype imputation
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz221
DEUS: an R package for accurate small RNA profiling based on differential expression of unique sequences
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz495
BIOLITMAP: a web-based geolocated, temporal and thematic visualization of the evolution of bioinformatics publications
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/bty967
Joint detection of germline and somatic copy number events in matched tumor-normal sample pairs
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz429
diSTruct v1.0: generating biomolecular structures from distance constraints
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz578
EpiSAFARI: sensitive detection of valleys in epigenetic signals for enhancing annotations of functional elements
来源期刊:BioinformaticsDOI:10.1093/bioinformatics/btz702